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YellowDog × Nextflow

Integrations

Run Nextflow pipelines across multiple clouds and on‑prem in one place. Scale faster, control costs, and route work to the best compute for every step.

Why run Nextflow on YellowDog?

YellowDog is an official Nextflow executor for the Seqera Platform that brings true hybrid and multi‑cloud scheduling to your pipelines—without lock‑in. Mix and match providers and on‑prem resources, then let the YellowDog Scheduler place tasks where they perform best.

Hybrid + Multi‑Cloud, by design

Run across on‑prem and all major cloud providers simultaneously.

Cost control without compromise

Use the right resource for each step. Blend on‑prem for steady workloads with cloud for elastic scale.

Enterprise‑ready scheduling

YellowDog intelligently provisions, schedules and monitors work to keep pipelines on track and within budget.

Faster time to insight

Burst to the capacity you need and reduce bottlenecks by parallelising work across diverse compute pools.

Route tasks by requirement

Direct GPU‑hungry stages to cloud, latency‑sensitive steps on‑prem, and everything else to the most efficient nodes.

No re‑architecture required

Keep using your Nextflow DSL and processes. Select YellowDog as the executor and go.

YellowDog orchestrates compute power for seamless scale

YellowDog has repeatedly demonstrated dramatically accelerated scientific discovery and decision-making when orchestration meets intelligent automation. The platform scales effortlessly to analyse hundreds of millions of data points — delivering results in hours, not weeks.

4,000+

Cloud Instances Orchestrated

400,000

Cores Operating in Parallel

Multiple

Global Regions Coordinated

95%

vCPU Utilisation 

337M+

Molecules / Data Points Screened

Minutes

To full scale deployment

Built for Life Sciences teams

YellowDog is uniquely positioned for genomics, bioinformatics, and drug discovery groups that depend on compute‑intensive pipelines and need the freedom to use the best infrastructure for every workload.

Biotech & Pharma

Accelerate R&D cycles and scale out analyses without overhauling your toolchain.

Research Institutes

Balance sensitive data, latency, and burst capacity with hybrid scheduling.

Clinical & Core Labs

Access elastic compute when needed; keep steady‑state work economical on‑prem.

See Nextflow + YellowDog in action

Talk to our team about your workloads and get hands‑on with hybrid and multi‑cloud scheduling.